学術論文 |
- "Phage lysis protein LysM acts as a wedge to block MurJ conformational changes," Science Advances, vol.11, ppady8083, Sep. 2025
- KOHGA Hidetaka, Napathip Lertpreedakorn, Ryoji Miyazaki, Sixian Wu, Kaito Hosoda, Hiroyuki Tanaka, Yutaro S. Takahashi, Kunihito Yoshikaie, Yutetsu Kuruma, Hideki Shigematsu, Takaharu Mori, Tomoya Tsukazaki
 [ NAISTレポジトリ ]
- "Structural basis of a GatC ortholog transporter in the bacterial phosphotransferase system," FEBS Letters, Aug. 2025
- Yutaro S. Takahashi, KOHGA Hidetaka, Chek Min Fey, Kotomi Yamamoto, Jun F. Takahashi, Hideki Shigematsu, Yoshiki Tanaka, Muneyoshi Ichikawa, Ryoji Miyazaki, Tomoya Tsukazaki
[ NAISTレポジトリ ]  [ doi:10.1002/1873-3468.70135 ]
- "Structural basis of lipopolysaccharide translocon assembly mediated by the small lipoprotein LptM," Cell Reports, vol.44, pp116013, Jul. 2025
- Ryoji Miyazaki, Mai Kimoto, KOHGA Hidetaka, Tomoya Tsukazaki
[ doi:10.1016/j.celrep.2025.116013 ]
- "Phage lysis protein LysM acts as a wedge to block MurJ conformational changes," bioRxiv, 26 Apr. 2025
- KOHGA Hidetaka, Napathip Lertpreedakorn, Ryoji Miyazaki, Sixian Wu, Hiroyuki Tanaka, Yutaro S. Takahashi, Kaito Hosoda, Kunihito Yoshikaie, Yutetsu Kuruma, Hideki Shigematsu, Takaharu Mori, Tomoya Tsukazaki
[ doi:10.1101/2025.04.26.650401 ]
- "Structural basis of a phosphotransferase system xylose transporter," bioRxiv, 3 Apr. 2025
- Yutaro S. Takahashi, KOHGA Hidetaka, Chek Min Fey, Kotomi Yamamoto, Jun F. Takahashi, Hideki Shigematsu, Yoshiki Tanaka, Muneyoshi Ichikawa, Ryoji Miyazaki, Toshio Hakoshima, Tomoya Tsukazaki
[ doi:10.1101/2025.04.02.646771 ]
- "Cleavage cascade of the sigma regulator FecR orchestrates TonB-dependent signal transduction," Proc. Natl. Acad. Sci. USA, vol.112, ppe2500366122, Apr. 2025
- Tatsuhiko Yokoyama, Ryoji Miyazaki, Takehiro Suzuki, Naoshi Dohmae, Hiroki Nagai, Tomoya Tsukazaki, Tomoko Kubori, Tomoko Kubori
[ doi:10.1073/pnas.2500366122 ]
- "Cleavage cascade of the sigma regulator FecR orchestrates TonB-dependent signal transduction ," bioRxiv, 8 Jan. 2025
- Tatsuhiko Yokoyama, Ryoji Miyazaki, Takehiro Suzuki, Naoshi Dohmae, Hiroki Nagai, Tomoya Tsukazaki, Tomoko Kubori, Yoshinori Akiyama
[ NAISTレポジトリ ] [ doi:10.1101/2025.01.06.631622 ]
- "Structural basis of lipopolysaccharide translocon assembly mediated by the small lipoprotein LptM," bioRxiv, 4 Jan. 2025
- Ryoji Miyazaki, Mai Kimoto, KOHGA Hidetaka, Tomoya Tsukazaki
[ NAISTレポジトリ ] [ doi:10.1101/2025.01.03.631273 ]
- "AFM observation of protein translocation mediated by one unit of SecYEG-SecA complex," Nature Communications, vol.16, pp255, Jan. 2025
- Yui Kanaoka, Takaharu Mori, Wataru Nagaike, Seira Itaya, Yuto Nonaka, KOHGA Hidetaka, Takamitsu Haruyama, Yasunori Sugano, Ryoji Miyazaki, Muneyoshi Ichikawa, Takayuki Uchihashi, Tomoya Tsukazaki
[ NAISTレポジトリ ] [ doi:10.1038/s41467-024-54875-x ]
- "Translation arrest cancellation of VemP, a secretion monitor in Vibrio, is regulated by multiple cis- and trans-factors, including SecY," Journal of Biological Chemistry, Sep. 2024
- Yuki Ikeda, Ryoji Miyazaki, Tomoya Tsukazaki, Yoshinori Akiyama, Hiroyuki Mori
[ NAISTレポジトリ ] [ doi:10.1016/j.jbc.2024.107735 ]
- "YeeD is an essential partner for YeeE-mediated thiosulfate uptake in bacteria and regulates thiosulfate ion decomposition," PLOS Biology, vol.22, ppe3002601, Apr. 2024
- Mai Ikei, Ryoji Miyazaki, Keigo Monden, Yusuke Naito, Azusa Takeuchi, Yutaro S. Takahashi, Yoshiki Tanaka, Keina Murata, Takaharu Mori, Muneyoshi Ichikawa, Tomoya Tsukazaki
[ NAISTレポジトリ ] [ doi:10.1371/journal.pbio.3002601 ]
- "Structure and function of a YeeE-YeeD complex for sophisticated thiosulfate uptake," bioRxiv, Jul. 2023
- Mai Ikei, Ryoji Miyazaki, Keigo Monden, Yusuke Naito, Azusa Takeuchi, Yutaro S. Takahashi, Yoshiki Tanaka, Takaharu Mori, Muneyoshi Ichikawa, Tomoya Tsukazaki
[ doi:10.1101/2023.07.28.550924 ]
- "Analyzing protein intermediate interactions in living E. coli cells using site-specific photo-crosslinking combined with chemical crosslinking ," STAR Protocols, vol.4, no.2, pp102178-102178, Jun. 2023
- Ryoji Miyazaki, Yoshinori Akiyama
[ doi:10.1016/j.xpro.2023.102178 ]
- "Critical residues of the antibiotic peptide LysM that inhibits lipid II flipping," bioRxiv, May. 2023
- 甲賀 栄貴, Napathip Lertpreedakorn, Ryoji Miyazaki, Tomoya Tsukazaki
[ doi:10.1101/2023.05.22.541694 ]
- "Inner membrane YfgM–PpiD heterodimer acts as a functional unit that associates with the SecY/E/G translocon and promotes protein translocation," Journal of Biological Chemistry, vol.298, no.11, pp102572, Sep. 2022
- Ryoji Miyazaki, Mengting Ai, Natusko Tanaka, Takehiro Suzuki, Naoshi Dhomae, Tomoya Tsukazaki, Yoshinori Akiyama, Hiroyuki Mori
- "A photo-crosslinking approach to monitor assembly of an LptD intermediate with LptE in a living cell.," Lipopolysaccharide Transport-Methods and Protocols, Methods Mol. Biol., vol.2548, pp97-107, Aug. 2022
- Ryoji Miyazaki, Mori Hiroyuki, Akiyama Yoshinori
[ doi:10.1007/978-1-0716-2581-1_7. ]
- "Edge-strand of BepA interacts with immature LptD on the β-barrel assembly machine to direct it to on- and off-pathways," eLife, vol.10, ppe70541, 31 Aug. 2021
- Ryoji Miyazaki, Tetsuro Watanabe, Kohei Yoshitani, Yoshinori Akiyama
[ doi:10.7554/eLife.70541 ]
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