小野　直亮

所属 データ駆動型サイエンス創造センター データ駆動型サイエンス創造センター、情報科学領域 AI応用情報学
職位 准教授
学位
研究室 データサイエンス部門、計算システムズ生物学
研究キーワード
 深層学習, マルチオミクス, 複雑系, システムズバイオロジー, バイオインフォマティクス
研究分野
 情報通信 / 計算科学 / , ライフサイエンス / ゲノム生物学 / , 情報通信 / 生命、健康、医療情報学 /
研究室概要
学術論文
"Explainable deep-learning-based ischemia detection using hybrid O-15 H2O perfusion positron emission tomography and computed tomography imaging with clinical data," Journal of Nuclear Cardiology, vol.38, pp101889, Aug. 2024
Jarmo Teuho, Jussi Schultz, Riku Klén, Luis Eduardo, Juarez-Orozco, Juhani Knuuti, Antti Saraste, Naoaki Ono, Shigehiko Kanaya
[ doi:10.1016/j.nuclcard.2024.101889 ]
"Quantitative evaluation model of variable diagnosis for chest X-ray images using deep learning," PLOS Digital Health, vol.3, no.5, ppe0000460, Mar. 2024
Shota Nakagawa, Naoaki Ono, Yukichika Hakamata, Takashi Ishii, Akira Saito, Shintaro Yanagimoto, Shigehiko Kanaya
[ doi:10.1371/journal.pdig.0000460 ]
"Information maximization-based clustering of histopathology images using deep learning," PLOS Digital Health, vol.2, no.12, ppe0000391, Dec. 2023
Mahfujul Islam Rumman, Naoaki Ono, Kenoki Ohuchida, MD. ALTAF-UL-AMIN, Alex Ming Huang, Shigehiko Kanaya
[ doi:10.1371/journal.pdig.0000391 ]
"On finding natural antibiotics based on TCM formulae," Methods, vol.214, pp35-45, Jun. 2023
Pei Gao, Nasution Ahmad Kamal, Shuo Yang, Zheng Chen, Naoaki Ono, Shigehiko Kanaya, MD. ALTAF-UL-AMIN
[ doi:10.1016/j.ymeth.2023.04.001 ]
"On QSAR-based cardiotoxicity modeling with the expressiveness-enhanced graph learning model and dual-threshold scheme," Frontiers in Physiology, vol.14, pp1156286, May. 2023
Huijia Wang, Guangxian Zhu, Leighton T Izu, Ye Chen-Izu, Naoaki Ono, MD. ALTAF-UL-AMIN, Shigehiko Kanaya, Alex Ming Huang
[ doi:10.3389/fphys.2023.1156286 ]
"Automated sleep staging via parallel frequency-cut attention," IEEE Transactions on Neural Systems and Rehabilitation Engineering, vol.31, pp1974-1985, Feb. 2023
Zheng Chen, Ziwei Yang, Lingwei Zhu, Wei Chen, Toshiyo Tamura, Naoaki Ono, MD. ALTAF-UL-AMIN, Shigehiko Kanaya, Alex Ming Huang
[ doi:10.1109/TNSRE.2023.3243589 ]
"Sleep Staging Framework with Physiologically Harmonized Sub-Networks," Methods (Elsevier), Dec. 2022
Zheng Chen, Ziwei Yang, Dong Wang, Xin Zhu, Naoaki Ono, MD. ALTAF-UL-AMIN, Shigehiko Kanaya
"Prediction of Potential Natural Antibiotics Plants Based on Jamu Formula Using Random Forest Classifier," Antibiotics, vol.11, no.9, Sep. 2022
Ahmad Kamal Nasution, Sony Hartono Wijaya, Pei Gao, Rumman Mahfujul Islam, Alex Ming Huang, Naoaki Ono, Shigehiko Kanaya, MD. ALTAF-UL-AMIN
[ doi:10.3390/antibiotics11091199 ]
"Automated Sleep Staging via Parallel Frequency-Cut Attention," arxiv, vol.2022, Jul. 2022
Zheng Chen, Ziwei Yang, Lingwei Zhu, Wei Chen, Toshiyo Tamura, 小野　直亮, MD. ALTAF-UL-AMIN, 金谷　重彦
"Recent Trends in Computational Research on Diseases," Life, vol.12, 14 Mar. 2022
MD. ALTAF-UL-AMIN, 金谷　重彦, 小野　直亮, 黄　銘
"Classification of ischemia from myocardial polar maps in 15O–H2O cardiac perfusion imaging using a convolutional neural network," Scientific Reposts, vol.12, pp2839, 18 Feb. 2022
Jarmo Teuho, Jussi Schultz, Riku Klen, Juhani Knuuti, Antti Saraste, Naoaki Ono, Shigehiko Kanaya
[ doi:10.1038/s41598-022-06604-x ]
"Discussion of Cuffless Blood Pressure Prediction Using Plethysmograph Based on a Longitudinal Experiment: Is the Individual Model Necessary?," Life, vol.12, no.1, pp11, Dec. 2021
Koshiro Kido, Zheng Chen, Toshiyo Tamura, Wei Chen, 小野　直亮, Masachika Takeuchi, MD. ALTAF-UL-AMIN, 金谷　重彦
"Evaluation of intercellular lipid lamellae in the stratum corneum by polarized microscopy," Skin Research & Technology, vol.28, no.3, pp391-401, 9 Nov. 2021
Naoki Asada, Ryo Morita, Rikae Kamiji, Mami Kuwajima, Masahiro Komorisono, Tatsuo Yamamura, Naoaki Ono, Shigehiko Kanaya, Shuichi Yoshikawa
[ doi:10.1111/srt.13109 ]
"Identification of Targeted Proteins by Jamu Formulas for Different Efficacies Using Machine Learning Approach," life, vol.11, no.866, 23 Aug. 2021
Sony Hartono Wijaya, Farit Mochamad Afendi, Irmanida Batubara, Alex Ming Huang, Naoaki Ono, Shigehiko Kanaya, MD. ALTAF-UL-AMIN
[ doi:10.3390/life11080866 ]
"A system biology approach based on metabolic biomarkers and protein-protein interactions for identifying pathways underlying schizophrenia and bipolar disorder," Scientific reports, vol.11, no.1, pp1-11, 14 Jul. 2021
MD. ALTAF-UL-AMIN, Kazuhisa Hirose, Joao V. Nani, Lucas C. Porta, Ljubica Tasic, Shaikh Farhad Hossain, Alex Ming Huang, Naoaki Ono, Mirian A. F. Hayashi, Shigehiko Kanaya
[ doi:10.1038/s41598-021-93653-3 ]
"The feasibility of predicting impending malignant ventricular arrhythmias by using nonlinear features of short heartbeat intervals," Computer Methods and Programs in Biomedicine, Jun. 2021
Zheng Chen, Naoaki Ono, Wei Chen, Toshiyo Tamura, MD. ALTAF-UL-AMIN, Shigehiko Kanaya, Alex Ming Huang
[ doi:10.1016/j.cmpb.2021.106102 ]
"A Real-Time Portable IoT System for Telework Tracking," Frontiers in Digital Health , vol.3, pp47, Jun. 2021
Zhang Yongxin, Chen Zheng, Tian Haoyu, Kido Koshiro, Naoaki Ono, Chen Wei, Tamura Toshiyo, MD. ALTAF-UL-AMIN, Shigehiko Kanaya, Alex Ming Huang
[ doi:10.3389/fdgth.2021.643042 ]
"Kinematics approach with neural networks for early detection of sepsis (KANNEDS)," BMC Medical Informatics and Decision Making, vol.21, no.1, pp1-11, 20 May. 2021
Marcio Freire Cruz, Naoaki Ono, Alex Ming Huang, MD. ALTAF-UL-AMIN, Shigehiko Kanaya, Carlos Arthur Mattos Teixeira Cavalcante
[ doi:10.1186/s12911-021-01529-3 ]
"Development of a biomarker database toward performing disease classification and finding disease interrelations," Database, 11 Mar. 2021
Shaikh Farhad Hossain, Alex Ming Huang, Naoaki Ono, Aki Morita, Shigehiko Kanaya, MD. ALTAF-UL-AMIN
[ doi:10.1093/database/baab011 ]
"Embedding of Molecular Structure Using Molecular Hypergraph Variational Autoencoder with Metric Learning," Molecular Informatics, vol.2020, 8 Nov. 2020
Daiki Koge, Naoaki Ono, Ming Huang, MD. ALTAF-UL-AMIN, Shigehiko Kanaya
[ doi:10.1002/minf.202000203 ]
"Divergence of metabolites in three phylogenetically close Monascus species (M. pilosus, M. ruber, and M. purpureus) based on secondary metabolite biosynthetic gene clusters," BMC Genomics, vol.2020, no.21, 1 Oct. 2020
Yuki Higa, Young-Soo Kim, MD. ALTAF-UL-AMIN, Alex Ming Huang, Naoaki Ono, Shigehiko Kanaya
[ doi:10.1186/s12864-020-06864-9 ]
"Databases for Natural Product Research," Comprehensive Natural Products III Chemistry and Biology, vol.7, pp222-238/, Sep. 2020
Shigehiko Kanaya, MD. ALTAF-UL-AMIN, Aki Morita Hirai, Alex Ming Huang, Naoaki Ono
[ doi:10.1016/B978-0-12-409547-2.14744-4 ]
"Discovery of inflammatory bowel disease-associated miRNAs using a novel bipartite clustering approach," MBC Medical Genomics, vol.13, no.3, pp1-10, Feb. 2020
MD. ALTAF-UL-AMIN, M. B. Karim, P. Hu, Naoaki Ono, Shigehiko Kanaya
"Relationships of Polymer Properties and Predicting Polymer Properties Based on Monomer Structure Information," Journal of Computer Aided Chemistry, vol.20, pp84-91, 26 Dec. 2019
Hitoshi Yamano, Tomoyuki Miyao, Naoaki Ono, Aki Morita, Shigehiko Kanaya
"Comprehensive Exploration of Target‐specific Ligands Using a Graph Convolution Neural Network," Molecular Informatics, 9 Dec. 2019
Yu Miyazaki, Naoaki Ono, Alex Ming Huang, MD. ALTAF-UL-AMIN, Shigehiko Kanaya
[ doi:10.1002/minf.201900095 ]
"Classification of alkaloids according to the starting substances of their biosynthetic pathways using graph convolutional neural networks," BMC bioinformatics, vol.20, no.1, pp380, Dec. 2019
Ryohei Eguchi, Naoaki Ono, Aki Hirai Morita, Tetsuo Katsuragi, Satoshi Nakamura, Alex Ming Huang, MD. ALTAF-UL-AMIN, Shigehiko Kanaya
[ doi:10.1186/s12859-019-2963-6 ]
"クラウドソーシングを活用した日本全体のCCMQ-J問診票調査における最適グループ数とその体質特性," 日本補完代替医療学会誌, vol.16, no.2, pp105-112, 2019.10
佐藤 真梨子, 川崎 聡大, Alex Ming Huang, 許 鳳浩, 小野　直亮, 江口 遼平, MD. ALTAF-UL-AMIN, 德田（角谷） 佐紀, 渡辺 斉志, 村山 宣人, Satoshi Nakamura, 山口 栞, 田中 宏季, Shigehiko Kanaya, 朱 燕波, 戴 昭宇, 王 琦, 上馬塲 和夫, 鈴木 信孝
[ doi:10.1625/jcam.16.105 ]
"ヘルスケアにかかわる7種の質問票によるCCMQ-Jの体質の推定と解釈法," Japanese Journal of Complementary and Alternative Medicine, vol.16, no.2, pp79-93, Oct. 2019
Guang SHI, Hoko KYO, Toshihiro KAWASAKI, Shigehiko Kanaya, Mariko SATO, Saki TOKUDA-KAKUTANI, Hiroshi WATANABE, Norihito MURAYAMA, Minako OHASHI, MD. ALTAF-UL-AMIN, Naoaki Ono, Hiroki Tanaka, Satoshi Nakamura, Kazuo UEBABA, Nobutaka SUZUKI, Alex Ming Huang
[ doi:10.1625/jcam.16.79 ]
"Prediction of Metabolite Activities by Repetitive Clustering of the Structural Similarity Based Networks," Journal of Computer Aided Chemistry, vol.20, Oct. 2019
Nobutaka Wakamatsu, 黄　銘, 小野　直亮, MD. ALTAF-UL-AMIN, 金谷　重彦
[ doi:10.2751/jcac.20.76 ]
"Chemoinformatics Approach for Estimating Recovery Rates of Pesticides in Fruits and Vegetables," Journal of Computer Aided Chemistry, vol.20, pp92-103, 2019.10
Takeshi Serino, Yoshizumi Takigawa, Sadao Nakamura, 黄　銘, 小野　直亮, MD. ALTAF-UL-AMIN, 金谷　重彦
[ doi:10.2751/jcac.20.92 ]
"深層学習による肺癌組織画像の特徴抽出と遺伝子発現パターンとの相関解析," THE LUNG perspectives, vol.27, no.3, pp51-54, 2019.8.30
小野　直亮, 齋藤　朗, 黄　銘, MD. ALTAF-UL-AMIN, 金谷　重彦
"BiClusO:A novel biclustering approach andbits application to species-VOC relational data," IEEE/ACM transactions on computational biology and bioinformatics, 1 Jun. 2019
Mohammad Bozlul Karim, Alex Ming Huang, Naoaki Ono, Shigehiko Kanaya, MD. ALTAF-UL-AMIN
[ doi:10.1109/TCBB.2019.2914901 ]
"A Novel CNN-Based Framework for Classification of Signal Quality and Sleep Position from a Capacitive ECG Measurement," Sensors, vol.19, no.7, 11 Apr. 2019
Koshiro Kido, Toshiyo Tamura, Naoaki Ono, MD. ALTAF-UL-AMIN, Masaki Sekine, Shigehiko Kanaya, Alex Ming Huang
"畳み込みニューラルネットワークを用いた画像解析," 日本化学会情報化学部会誌, vol.36, pp23-26, 2018.9
小野　直亮, 江口 遼平, 黄　銘, MD. ALTAF-UL-AMIN
"Classification of lung adenocarcinoma transcriptome subtypes from pathological images using deep convolutional networks," International Journal of Computer Assisted Radiology and Surgery, no.s11548-018-1853-2, 29 Aug. 2018
Victor Andrew A. Antonio, Naoaki Ono, Akira Saito, Tetsuo Sato, MD. ALTAF-UL-AMIN, Shigehiko Kanaya
"An integrative network-based approach to identify novel disease genes and pathways:a case study in the context of inflammatory bowel disease," BMC　Bioinformatics, no.s12859-018-2251-x, 13 Jul. 2018
Ryohei Eguchi, Mohammand Bozlul Karim, Pingzhao Hu, Tetsuo Sato, Naoaki Ono, Shigehiko Kanaya, MD. ALTAF-UL-AMIN
"Data Intensive Study of Accessibility of Edible Species and Healthcare Across the Globe," 日本補完代替医療学会誌, vol.5, no.1, pp37-60, 26 Feb. 2018
Satoshi Watanabe, Hoko Kyo, Liu Kang, Ryohei Eguchi, MD. ALTAF-UL-AMIN, Aki (Hirai) Morita, Minako Ohashi, Naoaki Ono, Alex Ming Huang, Yanbo Zhu, Qi Wang, Zhaoyu Dai, Yukiko Nakamura, Klaus W. Lange, Kazuo Uebaba, Shintaro Hashimoto, Shigehiko Kanaya, Nobutaka Suzuki
"Oviposition inhibitor in umbelliferous medicinal plants for the common yellow swallowtail (Papilio machaon)," Journal of Natural Medicines, vol.in press, no.1861-0293, pp1-5, 7 Sep. 2017
Chisato Morino, Yusuke Morita, Kazuki Minami, Yuto Nishidono, Yoshitaka Nakashima, Rika Ozawa, Junji Takabayashi, Naoaki Ono, Shigehiko Kanaya, Takayuki Tamura, Yasuhiro Tezuka, Ken Tanaka
"Classification of Alkaloid Compounds Based on Subring Skeleton (SRS) Profiling: On Finding Relationship of Compounds with Metabolic Pathways.," Journal of Computer Aided Chemistry, vol.18, pp58-75, 1 Aug. 2017
Ryohei Eguchi, Naoaki Ono, Hisayuki Horai, Md Altuf-Ul Amin, Aki Morita Hirai, Jun Kawahara, Shoji Kasahara, Tomoaki Endo, Shigehiko Kanaya
"遺伝子制御ネットワーク解析," 人工知能学大事典, pp985-987, 2017.8
小野　直亮
"世界の食材のアクセッシビリティによる地域区分:おいしさの多様性は理解できるか？," 明日の食品産業, no.477, pp24-29, 2017.6.1
Liu Kang, MD. ALTAF-UL-AMIN, 森田（平井）晶, 小野　直亮, 金谷　重彦
"Comparison of Clustering Methods in the Context of Chemical Structure Similarity Based Classification of VOCs," Procedia Chemistry, vol.20, pp40-44, 31 Dec. 2016
Azian Azamimi Abdullah, Md Altaf-Ul-Amin, Naoaki Ono, Nurlisa Yusuf, Ammar Zakaria, Takaaki Nishioka, Shigehiko Kanaya
"多変量解析法にもとづいた日本語版中医体質調査表(CCMQ-J)における各質問間相関の評価ならびにBMI、年齢の推定モデルの構築," 日本補完代替医療学会誌, vol.13, no.2, pp43-56, 2016.7.11
山森　明弘, 許　鳳浩, 渡辺　知幸, 黄　銘, 小野　直亮, 佐藤　哲大, 阿部　哲朗, 上馬場　和夫, 川端　克司, 今西　勁峰, MD. ALTAF-UL-AMIN, 朱　燕波, 戴　昭宇, 王　琦, 金谷　重彦, 太田　富久, 鈴木　信孝
"Comparison of Clustering Methods in the Context of Chemical Structure Similarity Based Classification of VOCs," Elsevier, Procedia Chemistry, Jul. 2016
Azian Azamimi Abdullah, MD. ALTAF-UL-AMIN, Naoaki Ono, Nurlisa Yusuf, Ammar Zakaria, Takaaki Nishioka, Shigehiko Kanaya
"Integrated pathway-based transcription regulation network mining and visualization based on gene expression profiles," Journal of biomedical informatics, vol.61, pp194-202, 30 Jun. 2016
Nelson Kibinge, Naoaki Ono, Masafumi Horie, Tetsuo Sato, Tadao Sugiura, MD. ALTAF-UL-AMIN, Akira Saito, Shigehiko Kanaya
"Utilization of KNApSAcK Family Databases for Developing Herbal Medicine Systems," Journal of Computer Aided Chemistry, vol.17, pp1-7, 30 May. 2016
Sony Hartono Wijaya, Yuki Tanaka, MD. ALTAF-UL-AMIN, Aki Hirai Morita, Farit Mochamad Afendi, Irmanida Batubara, Naoaki Ono, Latifah K. Darusman, Shigehiko Kanaya
"Selective regulation of pyrethrin biosynthesis by the specific blend of would induced volatiles in Tanacetum cinerariifolium," Plant signaling & behavior, vol.11, no.4, ppe1149675, 2 Apr. 2016
Koji Sakamori, Naoaki Ono, Makoto Ihara, Hideyuki Suzuki, H Matsuura, Ken Tanaka, Daisaku Ohta, Shigehiko Kanaya, Kazuhiko Matsuda
"新技術と研究紹介-ビッグデータ・フード・サイエンス：料理レシピと世界の食品アクセスにおけるデータ・サイエンス," 明日の食品産業, pp33-44, 2016.3
平井（森田）晶, 西原　典孝, 大橋　美名子, 冨田　圭子, 小島　誠也, 大西　啓介, 稲村　真弥, 生島　早紀子, 佐藤　哲大, 小野　直亮, 黄　銘, 鈴木　優, 中村　哲, 加藤　博一, 金谷　重彦
"Metabolomic Characterization of a Low Phytic Acid and High Anti-oxidative Cultivar of Turmeric," Natural Product Communications, vol.10, pp1-6, Nov. 2015
Ken Tanaka, Masanori Arita, Donghan Li, Naoaki Ono, Yasuhiro Tezuka, Shigehiko Kanaya
"ビッグ・データ・バイオロジー　医食同源と生態学の体系化に向けて," 化学と生物, vol.53, no.9, pp600-607, 2015.8
平井（森田）晶, 中村　由紀子, 黄　銘, 佐藤　哲大, 小野　直亮, 西岡　孝明, 白井　剛, 金谷　重彦
"Development and Mining of a Volatile Organic Compound Database," BioMed Research International, vol.2015, Jun. 2015
Azian Azamimi Abdullah, MD. ALTAF-UL-AMIN, Naoaki Ono, Tetsuo Sato, Tadao Sugiura, Aki Hirai Morita, Tetsuo Katsuragi, Ai Muto, Takaaki Nishioka, Shigehiko Kanaya
"Targeted Integration of RNA-Seq and Metabolite Data to Elucidate Curcuminoid Biosynthesis in Four Curcuma Species," Plant and Cell Physiology, Jan. 2015
L.Donghan, Naoaki Ono, Tetsuo Sato, Tadao Sugiura, MD. ALTAF-UL-AMIN, D. Ohta, H.Suzuki, M.Arita, K. Tanaka, Z. Ma, Shigehiko Kanaya
"Clustering of 3D-Structure Similarity Based Network of Secondary Metabolites Reveals Their Relationships with Biological Activities," Molecular Informatics, vol.33, pp790-801, Nov. 2014
Y. Ohtana, AA Abdullah, MD. ALTAF-UL-AMIN, M Huang, Naoaki Ono, Tetsuo Sato, Tadao Sugiura, H. Horai, Y. Nakazawa, A.H.Morita, K. Lange, N.Kibinge, T.Katsuragi, T.Shirai, Shigehiko Kanaya
"Clustering of 3D‐Structure Similarity Based Network of Secondary Metabolites Reveals Their Relationships with Biological Activities," Molecular Informatics, Nov. 2014
Yuki Ohtana,, Azian Azamimi Abdullah, MD. ALTAF-UL-AMIN, Ming Huang, Naoaki Ono, Tetsuo Sato, Tadao Sugiura, Hisayuki Horai, Yukiko Nakamura, Aki Morita, Klaus W. Lange, Nelson K. Kibinge, Tetsuo Katsuragi, Tsuyoshi Shirai, Shigehiko Kanaya
"Integration of Residue Attributes for Sequence Diversity Characterization of Terpenoid Enzymes," Bio Med Research International, vol.2014, 11 May. 2014
Nelson Kibinge, Shun Ikeda, Naoaki Ono, MD. ALTAF-UL-AMIN, Shigehiko Kanaya
"Supervised Clustering Based on DPClusO: Prediction of Plant-Disease Relations Using Jamu Formulas of KNApSAcK Database," Bio Med Research International, vol.2014, Apr. 2014
Sony Hartono Wijaya, Husnawati Husnawati, Farit Mochamad Afendi, Irmanida Batubara, Latifah K. Darusman, MD. ALTAF-UL-AMIN, Tetsuo Sato, Naoaki Ono, Tadao Sugiura, Shigehiko Kanaya
"An Unsupervised Approach to Predict Functional Relations between Genes Based on Expression Data," Bio Med Research International, vol.2014, 31 Mar. 2014
MD. ALTAF-UL-AMIN, Tetsuo Katsuragi, Tetsuo Sato, Naoaki Ono, Shigehiko Kanaya
"KNApSAcK Metabolite Activity Database for Retrieving the Relationships Between Metabolites and Biological Activities," Plant and Cell Physiology, vol.55, ppe7(1)-e7(9), 19 Feb. 2014
Yukiko Nakamura, Farit Mochamad Afendi, Aziza Kawsar Parvin, Naoaki Ono, Ken Tanaka, Aki Hirai Morita, Tetsuo Sato, Tadao Sugiura, MD. ALTAF-UL-AMIN, Shigehiko Kanaya
"Systematization of the protein sequence diversity in enzymes related to secondary metabolic pathways in plants, in the context of big data biology inspired by the KNApSAcK Motorcycle database," Plant and Cell Physiology, vol.54, no.5, pp711-727, Apr. 2013
Shun Ikeda, Takashi Abe, Yukiko Nakamura, Nelson Kibinge, Aki Hirai Morita, Atsushi Nakatani, Naoaki Ono, Toshimichi Ikemura, Kensuke Nakamura, MD. ALTAF-UL-AMIN, Shigehiko Kanaya
"料理のオミックス　食材からみえてくる雑煮とレトルト・カレーの構築原理," Foods & Food Ingredients Journal of Japan, vol.218, no.1, pp43-60, 2013.4
桂樹　哲雄, 小野　直亮, 森田（平井）　晶, 中村　由紀子, MD. ALTAF-UL-AMIN, 金谷　重彦
"Cuisine Omics: Fundamental Structures of Zouni and Retortable Pouched Pack of Curry Unveiled by Multivariate Analysis Based on Food Ingredients," Foods and Food Ingredients Journal of Japan, vol.218, no.1, pp43-60, Mar. 2013
Tetsuo Katsuragi, Naoaki Ono, Aki Hirai-Morita, Yukiko Nakamura, MD. ALTAF-UL-AMIN, Shigehiko Kanaya
"SS-m PMG and SS-GA: Tools for Finding Pathways and Dynamic Simulation of Metabolic Networks," Plant and Cell Physiology, vol.54, no.5, pp728-739, Mar. 2013
Tetsuo Katsuragi, Naoaki Ono, Keiichi Yasumoto, MD. ALTAF-UL-AMIN, Masami Y.Hirai, Kansuporn Sriyudthsak, Yuji Sawada, Yui Yamashita, Yukako Chiba, Hitoshi Onouchi, Toru Fujiwara, Satoshi Naito, Fumihide Shiraishi, Shigehiko Kanaya
"Development of a Physical Model-Based Algorithm for the Detection of Single-Nucleotide Substitutions by Using Tiling Microarrays.," PLoS ONE, vol.8, no.1, ppe54571, Jan. 2013
Naoaki Ono, Shingo Suzuki, Chikara Furusawa, Hiroshi Shimizu, Tetsuya Yomo
"Data Mining Methods for Omics and Knowledge of Crude Medicinal Plants toward Big Data Biology," Computational and Structural Biotechnology Journal , vol.4, no.5, ppe201301010, Jan. 2013
Farit M. Afendi, Naoaki Ono, Yukiko Nakamura, Kensuke Nakamura, Latifah K. Darusman, Nelson Kibinge, Aki Hirai Morita, Ken Tanaka, Hisayuki Horai, MD. ALTAF-UL-AMIN, Shigehiko Kanaya
"KNApSAcK-3D: A Three-Dimensional Structure Database of Plant Metabolites," Plant Cell Physiol., vol.54, no.2, ppe4(1-8), 2013
Kensuke Nakamura, Naoki Shimura, Yuuki Otabe, Aki Hirai-Morita, Yukiko Nakamura, Naoaki Ono, MD. ALTAF-UL-AMIN, Shigehiko Kanaya
"A FOUR-CLADE PHYLOGENETIC ANALYSIS OF PLASMODIUM, TRYPANPANOSOMA, LEISHMANIA AND MOSQUITO GENERA: LATERAL GENE TRANSFER OR CONVERGENT EVOLUTION," RESEARCH COMMUNICATIONS IN Biochemistry and Cell & Molecular Biology, 2012
Nelson Kibinge, Shun Ikeda, Kensuke Nakamura, Farit Afendi, MD. ALTAF-UL-AMIN, Naoaki Ono, Shigehiko Kanaya
"オミックス・プラットフォーム：バイオ・ビッグ・データに挑む," 生物工学会誌, vol.90, no.12, pp777-781, 2012
池田俊, 桂樹哲雄, 小野　直亮, 中谷淳至, 中村由紀子, 森田晶, 金谷　重彦
"Cyclo[8]isoindoles: Ring-Expanded and Annelated Porphyrinoids," Angew. Chem. Int. Ed., vol.50, pp5699-5703, Jun. 2011
T. Okujima, G. Jin, N. Matsumoto, J. Mack, S. Mori, K. Ohara, D. Kuzuhara, C. Ando, N. Ono, H. Yamada, H. Uno, N. Kobayashi
"Synthesis, crystal structure, and photodynamics of π-expanded porphyrin-fullrene dyads synthesized by Diels-Alder reaction," J. Phys. Chem. B, vol.114, no.45, pp14717–14728, Mar. 2011
Hiroko Yamada, K. Ohkubo, D. Kuzuhara, T. Takahashi, A. S. D. Sandanayaka, T. Okujima, K. Ohara, O. Ito, H. Uno, N. Ono, S. Fukuzumi
"Tetrabenzodiazaporphyrin: The semiconducting hybrid of tetrabenzoporphyrin and phthalocyanine," J. Porphyrins Phthalocyanines, vol.15, no.7-8, pp697, 2011
T. Okujima, G. Jin, S. Ohtsubo, S. Aramaki, N. Ono, H. Yamada, H. Uno
"Cyclo[8]isoindoles: Ring-Expanded and Annelated Porphyrinoids," Angew. Chem. Int. Ed., vol.50, no.25, pp5699, 2011
T. Okujima, G. Jin, N. Matsumoto, J. Mack, S. Mori, K. Ohara, D. Kuzuhara, C. Ando, N. Ono, H. Yamada, H. Uno, N. Kobayashi
"Synthesis and properties of BCOD-fused trithiasapphyrin and trithiabenzosapphyrins," Tetrahedron,, vol.66, pp7213-7218, 2010.8
T. Okujima, T. Kikkawa, S. Kawakami, Y. Shimizu, H. Ymada, N. Ono, H. Uno
"Synthesis of p-expanded BODIPYs and their fluorescent properties in the visibleeneareinfrared region.," Tetrahedron,, vol.66, pp6895-6900, 2010.8
T. Okujima, Y. Tomimori, J. Nakamura, H. Yamada, H. Uno, N. Ono
"Synthesis, crystal structure, and photodynamics of p-expanded porphyrin-fullrene dyads synthesized by Diels-Alder reaction.," J. Phys. Chem. B, vol.114, no.45, pp14717-14728, 2010.6
H, Yamada, K. Ohkubo, D. Kuzuhara, T. Takahashi, A. S. D. Sandanayaka, T. Okujima, K. Ohara, O. Ito, H. Uno, N. Ono, S. Fukuzumi
"Synthesis of 2,3-dihydrobenzo[1,4]dithiin-fused porphyrins,," Phosphorus, Sulfur Silicon Relat. Elem., vol.185, pp1108-1116, 2010.3
G. Jin, T. Okujima, Y. Hashimoto, H. Yamada, H. Uno, N. Ono
"Synthesis and photochemical properties of a-diketoporphyrins as precursors for p-expanded porphyrins.," J. Mater. Chem., vol.20, pp3011-3024, 2010.2
H. Yamada, D. Kuzuhara, K. Ohkubo, T. Takahashi, T. Okujima, H. Uno, N. Ono, S. Fukuzumi
"Highly pure synthesis, spectral assignments, and two-photon properties of cruciform porphyrin pentamers fused with benzene units.," Chem. Eur. J., vol.16, pp4063-4074, 2010.2
H. Uoyama, K. S. Kim, K. Kuroki, J.-Y. Shin, T. Nagata, T. Okujima, H. Yamada, N. Ono, Kim, D. Kim, H. Uno.
"Synthesis of p-expanded BODIPYs and their fluorescent properties in the visibleeneareinfrared region.," Tetrahedron, vol.66, no.34, pp6895, 2010
T. Okujima, Y. Tomimori, J. Nakamura, H. Yamada, H. Uno, N. Ono
"Synthesis of tetrabenzoporphyrins fused with fluoranthenes.," Heterocycles, vol.80, no.2, pp1165, 2010
J. Nakamura, T. Okujima, Y. Tomimori, N. Komobuchi, H. Yamada, H. Uno, N. Ono
"Synthesis of 2,3-dihydrobenzo[1,4]dithiin-fused porphyrins,," Phosphorus, Sulfur Silicon Relat. Elem., vol.185, pp1108, 2010
G. Jin, T. Okujima, Y. Hashimoto, H. Yamada, H. Uno, N. Ono
"Highly pure synthesis, spectral assignments, and two-photon properties of cruciform porphyrin pentamers fused with benzene units.," Chem. Eur. J., vol.16, no.1, pp4063, 2010
H. Uoyama, K. S. Kim, K. Kuroki, J.-Y. Shin, T. Nagata, T. Okujima, H. Yamada, N. Ono, Kim, D. Kim, H. Uno.
"Synthesis and photochemical properties of a-diketoporphyrins as precursors for π-expanded porphyrins," J. Mater. Chem, vol.20, pp3011, 2010
H. Yamada, D. Kuzuhara, K. Ohkubo, T. Takahashi, T. Okujima, H. Uno, N. Ono, S. Fukuzumi
"Synthesis of tetrabenzoporphurins fused with fluoranthenes,," Heterocycles, vol.80, pp1165-1175, 2010
J. Nakamura, T. Okujima, Y. Tomimori, N. Komobuchi, H. Yamada, H. Uno, N. Ono
"Absorption and Emission Properties of Acenaphthoporphyrins.," Mol. Cryst. Liq. Cryst., vol.505, pp349-355, 2009
J. Nakamura, N. Ono, H. Yamada, T. Okujima
"Synthesis, structures, and optical and electrochemical properties of benzoporphycenes,," Chem. Eur. J., vol.15, pp10060-10069, 2009
D. Kuzuhara, J. Mack, H. Yamada, T. Okujima, N. Ono, N. Kobayashi
"Organic thin-film transistor from a pentacene photo precursor,," Jpn J. Appl. Phys,, vol.48, pp051505/1-5, 2009
A. Masumoto, Y. Yamashita, S. Go, T. Kikuchi, H. Yamada, T. Okujima, N. Ono, H. Uno
"Synthesis of mono-, di- and tribenzoporphyrins from their soluble precursors,," Heterocycles, vol.77, pp1235-1248, 2009
T. Okujima, Y. Hashimoto, G. Jin, H. Yamada, N. Ono
"First Synthesis of Porphyrin-Fused 1,10-Phenanthroline-Ruthenium(II) Complexes,," Org. Lett., vol.11, pp4088-4091, 2009
T. Okujima, A. Mifuji, J. Nakamura, H. Yamada, H. Uno, N. Ono
"Aminoisoindole as a useful p-system elongation unit.," Tetahedron, vol.65, pp4345-4350, 2009
T. Akiyama, H. Uoyama, T. Okujima, H. Yamada, N. Ono, H. Uno
"Comprehensive analysis of the effects of Escherichia coli ORFs on protein translation reaction.," Mol Cell Proteomics, vol.7, no.8, pp1530, Aug. 2008
Kazuta Y, Adachi J, Matsuura T, Ono N, Mori H, Yomo T.
[ doi:10.1074/mcp.M800051-MCP200 ]
"Comprehensive analysis of the effects of Escherichia coli ORFs on protein translation reaction.," Mol Cell Proteomics, vol.7, no.8, pp1530, Aug. 2008
Kazuta Y, Adachi J, Matsuura T, Ono N, Mori H, Yomo T.
[ doi:10.1074/mcp.M800051-MCP200 ]
"Organic semiconductors based on small molecules with thermally or photochemically removable groups," Chem. Commun, no.26, pp2957-2974, 2008
H. Yamada, T. Okujima, N. Ono,
"Soluble precursors of 2,3-naphthalocyanine and phthalocyanine for use in thin film transistors," Chem. Commun., pp4714-4716, 2008
A. Hirao, T. Akiyama, T. Okujima, H. Yamada, H. Uno, Y. Sakai, S. Aramaki, N. Ono
"A facile one pot synthesis of meso-aryl-substituted [14]triphyrin(2.1.1). (Highlight of Angew. Chem. Int Ed.)," J. Am. Chem. Soc., vol.130, no.49, pp16478-16479, 2008
Z.-L. Xue, Z. Shen, J. Mack, D. Kuzuhara, H. Yamada, T. Okujima, N. Ono, X.-Z. You, N. Kobayashi
"Synthesis and characterization of tetraanthroporphyrins," Org. Lett., vol.10, pp2947-2950, 2008
H. Yamada, D. Kuzuhara, T. Takahashi, Y. Shimizu, K. Uota, T. Okujima, H. Uno, N. Ono
"Selective synthesis of 5-alkenyl-15-alkynyl-porphyrin and 5,15-dialkynyl-porphyrin by 2+2 acid-catalyzed condensation of dipyrrylmethane and TMS propynal," Tetrahedron Lett., vol.49, no.32, pp4731-4733, 2008
H. Yamada, K. Kushibe, S. Mitsuogi, T. Okujima, H. Uno, N. Ono
"Synthesis of extremely soluble precursors of tetrabenzoporphyrins.," Tetrahedron, vol.64, pp2405-2411, 2008
T. Okujima, Y. Hashimoto, G. Jin, H. Yamada, H. Uno, N. Ono
"Synthesis of phthalocyanine fused with bicycle[2.2.2]octadienes and thermal conversion into naphthalocyanine.," Heterocycles, vol.74, pp835-843, 2007
T. Akiyama, A. Hirao, T. Okujima, H. Yamada, H. Uno, N. Ono,
"Solution-processed polycrystalline copper tetrabenzoporphyrins thin-film transistors.," Synth. Metals, vol.157, pp190-197, 2007
P. B. Shea, L.R. Pattison, M. Kawano, C. Chen, J. Chen, P. Petroff, D. C. Martin, H. Yamada, N. Ono, J. Kanicki.
"Polycrystalline tetrabenzoporphyrin organic field-effect transistors with nanostructuired channels.," Appl. Phys. Lett., vol.90, pp233107/0-3, 2007
P. B. Shea, C. Chen, J. Kanicki, L.R. Pattison, P. Petroff, H. Yamada, N. Ono
"Photocurrent generation of benzoporphyrin films prepared by solution process.," J. Porphyrins Phthalocyanines, vol.11, pp383-389, 2007
H. Yamada, N. Kamio, A. Ohishi, M. Kawano, T. Okujima, N. Ono
"A new synthesis of tetra(quinoxalino)tetraazaporphyrin by retro Diels-Alder reaction of a soluble precursor.," J. Porphyrins Phthalocyanines, vol.10, pp1197-1201, 2006
T. Okujima, M. Kikuchi, H. Yamada, H. Uno, N. Ono
"Effective photochemical synthesis of an air-stable anthracene-based organic semiconductor from its diketone precursor.," Tetrahedron Lett., vol.47, pp7501-7504, 2006
H. Yamada, E. Kawamura, S. Sakamoto, Y. Yamashita, T. Okujima, H. Uno, N. Ono.
"Solution-processed nickel tetrabenzoporphyrin thin-film transistors.," J. Appl. Phys.,, vol.100, pp034502/0-7, 2006
P. B. Shea, J. Kanicki, L.R. Pattison, P. Petroff, M. Kawano, H. Yamada, N. Ono.
"Novel one-pot synthesis of 5-alkenyl-15-alkynylporphyrins and their derivatisation to a butadiyne-linked benzoporphyrin dimer.," Chem. Commun., pp383-385, 2006
H. Yamada, K. Kushibe, T. Okujima, H. Uno, N. Ono
"Synthesis of 4,7-dihydro-2H-isoindole derivatives via Diels-Alder reaction of tosylacetylene.," Heterocycles, vol.70, pp619-626, 2006
T. Okujima, G. Jin, Y. Hashimoto, H. Yamada, H. Uno, N. Ono.
"Photochemical synthesis of pentacene and its derivatives.," Tetrahedron Lett., vol.46, pp1981-1983, 2005
H. Uno, Y. Yamashita, M. Kikuchi, H. Watanabe, H. Yamada, T. Okujima, T. Ogawa, N. Ono.
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