学術論文 |
- "Structural robustness and temporal vulnerability of the starvation-responsive metabolic network in healthy and obese mouse liver," Science Signaling, vol.18, no.883, 22 Apr. 2025
- Keigo Morita, Atsushi Hatano, Toshiya Kokaji, Hikaru Sugimoto, Takaho Tsuchiya, Haruka Ozaki, Riku Egami, Dongzi Li, Akira Terakawa, Satoshi Ohno, Hiroshi Inoue, Yuka Inaba, Yutaka Suzuki, Masaki Matsumoto, Masatomo Takahashi, Yoshihiro Izumi, Takeshi Bamba, Akiyoshi Hirayama, Tomoyoshi Soga, Shinya Kuroda
- "Time and dose selective glucose metabolism for glucose homeostasis and energy conversion in the liver," NPJ systems biology and applications, vol.10, no.1, pp107, 30 Sep. 2024
- Yifei Pan, Atsushi Hatano, Satoshi Ohno, Keigo Morita, Toshiya Kokaji, Yunfan Bai, Hikaru Sugimoto, Riku Egami, Akira Terakawa, Dongzi Li, Saori Uematsu, Hideki Maehara, Suguru Fujita, Hiroshi Inoue, Yuka Inaba, Atsushi J. Nagano, Akiyoshi Hirayama, Tomoyoshi Soga, Shinya Kuroda
 [ doi:10.1038/s41540-024-00437-2 ]
- "Trans-omic analysis reveals opposite metabolic dysregulation between feeding and fasting in liver associated with obesity," iScience, pp109121, 26 Feb. 2024
- Yunfan Bai, Keigo Morita, Toshiya Kokaji, Atsushi Hatano, Satoshi Ohno, Riku Egami, Yifei Pan, Dongzi Li, Katsuyuki Yugi, Saori Uematsu, Hiroshi Inoue, Yuka Inaba, Yutaka Suzuki, Masaki Matsumoto, Masatomo Takahashi, Yoshihiro Izumi, Takeshi Bamba, Akiyoshi Hirayama, Tomoyoshi Soga, Shinya Kuroda
[ doi:10.1016/j.isci.2024.109121 ]
- "DNA hypomethylation characterizes genes encoding tissue-dominant functional proteins in liver and skeletal muscle," Scientific reports, vol.13, no.1, pp19118, 5 Nov. 2023
- Hideki Maehara, Toshiya Kokaji, Atsushi Hatano, Yutaka Suzuki, Masaki Matsumoto, Keiichi I. Nakayama, Riku Egami, Takaho Tsuchiya, Haruka Ozaki, Keigo Morita, Masaki Shirai, Dongzi Li, Akira Terakawa, Saori Uematsu, Ken-ichi Hironaka, Satoshi Ohno, Hiroyuki Kubota, Hiromitsu Araki, Fumihito Miura, Takashi Ito, Shinya Kuroda
[ doi:10.1038/s41598-023-46393-5 ]
- " Acquisition of Neural Fate by Combination of BMP Blockade and Chromatin Modification," iScience, vol.26, pp107887, 7 Sep. 2023
- Agnes Ong Lee Chen, Toshiya Kokaji, Arisa Kishi, Yoshihiro Takihara, Takuma Shinozuka, Ren Shimamoto, Ayako Isotani, Manabu Shirai, Noriaki Sasai
 [ NAISTレポジトリ ]
- "Comparison of hepatic responses to glucose perturbation between healthy and obese mice based on the edge type of network structures," Scientific reports, vol.13, no.1, pp4758, 23 Mar. 2023
- Yuki Ito, Shinsuke Uda, Toshiya Kokaji, Akiyoshi Hirayama, Tomoyoshi Soga, Yutaka Suzuki, Shinya Kuroda, Hiroyuki Kubota
- "Optogenetic decoding of Akt2-regulated metabolic signaling pathways in skeletal muscle cells using transomics analysis," Science signaling, vol.16, no.773, ppeabn0782, 2023.2.21
- Genki Kawamura, Toshiya Kokaji, Kentaro Kawata, Yuka Sekine, Yutaka Suzuki, Tomoyoshi Soga, Yoshibumi Ueda, Mizuki Endo, Shinya Kuroda, Takeaki Ozawa
- "In vivo transomic analyses of glucose-responsive metabolism in skeletal muscle reveal core differences between the healthy and obese states," Scientific Reports, vol.12, no.1, pp13719, 12 Aug. 2022
- Toshiya Kokaji, Miki Eto, Atsushi Hatano, Katsuyuki Yugi, Keigo Morita, Satoshi Ohno, Masashi Fujii, Ken-ichi Hironaka, Yuki Ito, Riku Egami, Saori Uematsu, Akira Terakawa, Yifei Pan, Hideki Maehara, Dongzi Li, Yunfan Bai, Takaho Tsuchiya, Haruka Ozaki, Hiroshi Inoue, Hiroyuki Kubota, Yutaka Suzuki, Akiyoshi Hirayama, Tomoyoshi Soga, Shinya Kuroda
- "Construction of an inter-organ transomic network for whole-body metabolism," Current Opinion in Endocrine and Metabolic Research, vol.25, pp100361, 28 May. 2022
- Toshiya Kokaji, Shinya Kuroda
- "Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes," iScience, vol.25, no.5, pp104231, 20 May. 2022
- Akira Terakawa, Yanhui Hu, Toshiya Kokaji, Katsuyuki Yugi, Keigo Morita, Satoshi Ohno, Yifei Pan, Yunfan Bai, Andrey A. Parkhitko, Xiaochun Ni, John M. Asara, Martha L. Bulyk, Norbert Perrimon, Shinya Kuroda
[ doi:10.1016/j.isci.2022.104231 ]
- "Multi-omics-based label-free metabolic flux inference reveals obesity-associated dysregulatory mechanisms in liver glucose metabolism," iScience, vol.25, no.2, pp103787, 3 Feb. 2022
- 植松沙織, 大野聡, 田中香織, 幡野敦, 小鍛治俊也, 伊藤有紀, 久保田浩行, 廣中謙一, 鈴木穣, 松本雅記, 中山敬一, 平山明由, 曽我朋義, 黒田真也
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