学術論文 |
- "BAF60/SWP73 subunits define subclasses of SWI/SNF chromatin remodelling complexes in Arabidopsis," New Phytologist, 22 May. 2025
- Sebastian P Sacharowski, Szymon Kubala, Pawel Cwiek, Jaroslaw Steciuk, Dominika Gratkowska-Zmuda, Paulina Oksinska, Ernest Bucior, Anna T Rolicka, Monika Ciesla, Klaudia Nowicka, Saleh Alseekh, Takayuki Tohge, Patrick Giavalisco, Dorota L Zugaj, Sara C Stolze, Anne Harzen, Rainer Franzen, Bruno Huettel, Elzbieta Grzesiuk, Mohammad-Reza Hajirezaei, Hirofumi Nakagami, Csaba Koncz, Alisdair R Fernie, Tomasz J Sarnowski
 [ doi:10.1111/nph.70182 ]
- "Prospects for functional genomics of genes involved in coffee-specialized metabolism through cross-species integrative omics," Current Opinion in Plant Biology, vol.85, pp102729, 25 Apr. 2025
- Maria Kenosis Emmanuelle Lachica, Mutsumi Watanabe, Shigehiko Kanaya, Alisdair R. Fernie, Takayuki Tohge
- "Co-option and neofunctionalization of stomatal executors for defence against herbivores in Brassicales," Nature Plants, vol.2025, 24 Feb. 2025
- Makoto Shirakawa, Tomoki Oguro, Shigeo S. Sugano, Shohei Yamaoka, Mayu Sagara, Mai Tanida, Kyoko Sunuma, Takuya Iwami, Tatsuyoshi Nakanishi, Keita Horiuchi, Kie Kumaishi, Soma Yoshida, Mutsumi Watanabe, Takayuki Tohge, Takamasa Suzuki, Yasunori Ichihashi, Atsushi Takemiya, Nobutoshi Yamaguchi, Takayuki Kohchi, Toshiro Ito
[ doi:10.1038/s41477-025-01921-1 ]
- "Unveiling the regulatory role of DzAGL6-1 in carotenoid biosynthesis during durian (Durio zibethinus) fruit development," Plant cell reports, vol.43, no.9, 17 Aug. 2024
- Kittiya Tantisuwanichkul, Shinichiro Komaki, Mutsumi Watanabe, Takayuki Tohge, Supaart Sirikantaramas
[ doi:10.1007/s00299-024-03302-y ]
- "Non-targeted discovery of high-value bio-products in Nicotiana glauca L: a potential renewable plant feedstock," Bioresources and Bioprocessing, vol.11, pp12, 18 Jan. 2024
- Natalia Carreno-Quintero, Takayuki Tohge, Rebecca Van Acker, Lauren S McKee, Qi Zhou, Antje Bolze, Xiaohui Xing, Merve Özparpucu, Markus Rüggeberg, Thomas Piofczyk, Yaw Koram, Vincent Bulone, Wout Boerjan, Alisdair R Fernie, Paul D Fraser
[ doi:10.1186/s40643-023-00726-4 ]
- "Co-option and neofunctionalization of stomatal executors for defense against herbivores in Brassicales," 11 Dec. 2023
- Makoto Shirakawa, Tomoki Oguro, Shigeo Sugano, Shohei Yamaoka, Mayu Sagara, Mai Tanida, Kyoko Sunuma, Takuya Iwami, Tatsuyoshi Nakanishi, Keita Horiuchi, Kie Kumaishi, Soma Yoshida, Mutsumi Watanabe, Takayuki Tohge, Takamasa Suzuki, Yasunori Ichihashi, Atsushi Takemiya, Nobutoshi Yamaguchi, Takayuki Kohchi, Toshiro Ito
[ doi:10.21203/rs.3.rs-3632546/v1 ]
- "Species-specific 'specialized' genomic region provides the new insights into the functional genomics characterizing metabolic polymorphisms in plants," Current Opinion in Plant Biology, vol.75, pp102427, Oct. 2023
- Mutsumi Watanabe, Takayuki Tohge
[ doi:10.1016/j.pbi.2023.102427 ]
- "Genome-wide association studies identify loci controlling specialized seed metabolites in Arabidopsis," Plant Physiology, vol.kiad511, Sep. 2023
- Thomas Naake, Feng Zhu, Saleh Alseekh, Federico Scossa, Leonardo Perez de Souza, Monica Borghi, Yariv Brotman, Tetsuya Mori, Ryo Nakabayashi, Takayuki Tohge, Alisdair R Fernie
[ doi:10.1093/plphys/kiad511 ]
- "Cross-Species Metabolomic Analyses in the Brassicaceae Reveals Common Responses to Ultraviolet-B Exposure," Plant Cell Physiology, vol.pcad085, Aug. 2023
- Yue Jing, Mutsumi Watanabe, Fayezeh Aarabi, Alisdair R Fernie, Monica Borghi, Takayuki Tohge
[ doi:10.1093/pcp/pcad085 ]
- "Editorial: Towards plant-based foods: from plant biodiversity to discovery of sensorially active compounds," Frontiers in Plant Science, vol.14, pp1240745, Jul. 2023
- Gholamreza Khaksar, Takayuki Tohge, Supaart Sirikantaramas
[ doi:10.3389/fpls.2023.1240745 ]
- "Decreased metabolic diversity in common beans associated with domestication revealed by untargeted metabolomics, information theory, and molecular networking," The Plant Journal, vol.115, no.4, pp1021-1036, Jun. 2023
- Leonardo Perez de Souza, Elena Bitocchi, Roberto Papa, Takayuki Tohge, Alisdair R. Fernie
[ doi:10.1111/tpj.16277 ]
- "Necrotrophic fungal infection affects indolic glucosinolate metabolism in Brassica rapa," Acta Physiologiae Plantarum, vol.45, no.64, Mar. 2023
- Tahereh A. Aghajanzadeh, Mutsumi Watanabe, Takayuki Tohge, Malcolm J. Hawkesford, Alisdair R. Fernie, Rainer Hoefgen, J. Theo M. Elzenga, Luit J. De Kok
[ doi:10.1007/s11738-023-03546-3 ]
- "High-energy-level metabolism and transport occur at the transition from closed to open flowers," Plant Physiology, vol.Online ahead of print, 28 May. 2022
- Monica Borghi, Leonardo Perez de Souza, Takayuki Tohge, Jianing Mi, Giovanni Melandri, Sebastian Proost, Marina C M Martins, Salim Al-Babili, Harro J Bouwmeester, Alisdair R Fernie
[ doi:10.1093/plphys/kiac253 ]
- "A comparative transcriptomics and eQTL approach identifies SlWD40 as a tomato fruit ripening regulator," Plant Physiology, vol.Online ahead of print, 4 May. 2022
- Feng Zhu, Sagar Sudam Jadhav, Takayuki Tohge, Mohamed A Salem, Je Min Li, James J Giovannoni, Yunjiang Cheng, Saleh Alseekh, Alisdair R Fernie
[ doi:10.1093/plphys/kiac200 ]
- "AtGH3.10 is another jasmonic acid-amido synthetase in Arabidopsis thaliana," The Plant Journal, 4 Mar. 2022
- Jay C. Delfin, Yuri Kanno, Mitsunori Seo, Naoki Kitaoka, Hideyuki Matsuura, Takayuki Tohge, Takafumi Shimizu
[ doi:10.1111/tpj.15724 ]
- "Diversification of Chemical Structures of Methoxylated Flavonoids and Genes Encoding Flavonoid-O-Methyltransferases," Plants (Basal), vol.11, no.4, pp564, 21 Feb. 2022
- Yuting Liu, Alisdair R Fernie, Takayuki Tohge
[ doi:10.3390/plants11040564 ]
- "An Oryza-specific hydroxycinnamoyl tyramine gene cluster contributes to enhanced disease resistance," Science Bulletin, vol.66, no.23, pp2369-2380, 5 Nov. 2021
- Shuangqian Shen, Meng Peng, Hong Fang, Zixuan Wang, Shen Zhou, Xinyu Jing, Meng Zhang, Chenkun Yang, Hao Guo, Yufei Li, Long Lei, Yuheng Shi, Yangyang Sun, Xianqing Li, Congping Xu, Takayuki Tohge, Meng Yuan, Alisdair Fernie, Yuese Ning, Guo-Liang Wang, Jie Luo
- "A Chimeric TGA Repressor Slows Down Fruit Maturation and Ripening in Tomato," Plant Cell Physiology, vol.Online ahead of print, 19 Oct. 2021
- Martine Lemaire-Chamley, Claude Koutouan, Joana Jorly, Julien Assali, Takuya Yoshida, Marilise Nogueira, Takayuki Tohge, Carine Ferrand, Lázaro E P Peres, Erika Asamizu, Hiroshi Ezura, Paul D Fraser, Mohammad-Reza Hajirezaei, Alisdair R Fernie, Christophe Rothan
[ doi:10.1093/pcp/pcab150 ]
- "Cheminformatics modeling of the correlation between Bupleurum Root-formula medicines and the Excess and Deficiency pattern in the diagnostic criteria of Sho in Kampo (traditional Japanese medicine) by non-targeted direct infusion mass spectrometry with machine learning," Journal of Natural Medicines, vol.acceptted, 29 Sep. 2021
- Taketo Okada, Takao Namiki, Takayuki Tohge, Shigehiko Kanaya
[ doi:10.1007/s11418-021-01577-z ]
- "Sulfur deficiency-induced genes affect seed protein accumulation and composition under sulfate deprivation," Plant Physiology, vol.Online ahead of print, 10 Aug. 2021
- Fayezeh Aarabi, Apidet Rakpenthai, Rouhollah Barahimipour, Michal Gorka, Saleh Alseekh, Youjun Zhang, Mohamed A Salem, Franziska Brückner, Nooshin Omranian, Mutsumi Watanabe, Zoran Nikoloski, Patrick Giavalisco, Takayuki Tohge, Alexander Graf, Alisdair R Fernie, Rainer Hoefgen
[ doi:10.1093/plphys/kiab386 ]
- "Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices," Nature Methods, vol.18, pp747-756, 8 Jul. 2021
- Saleh Alseekh, Asaph Aharoni, Yariv Brotman, Kévin Contrepois, John D'Auria, Jan Ewald, Jennifer C Ewald, Paul D Fraser, Patrick Giavalisco, Robert D Hall, Matthias Heinemann, Hannes Link, Jie Luo, Steffen Neumann, Jens Nielsen, Leonardo Perez de Souza, Kazuki Saito, Uwe Sauer, Frank C Schroeder, Stefan Schuster, Gary Siuzdak, Aleksandra Skirycz, Lloyd W Sumner, Michael P Snyder, Huiru Tang, Takayuki Tohge, Yulan Wang, Weiwei Wen, Si Wu, Guowang Xu, Nicola Zamboni, Alisdair R Fernie
[ doi:10.1038/s41592-021-01197-1 ]
- "Assessing Dynamic Changes of Taste-Related Primary Metabolism During Ripening of Durian Pulp Using Metabolomic and Transcriptomic Analyses," Frontiers in Plant Science, vol.12, pp687799, 18 Jun. 2021
- Lalida Sangpong, Gholamreza Khaksar, Pinnapat Pinsorn, Akira Oikawa, Ryosuke Sasaki, Alexander Erban, Mutsumi Watanabe, Karan Wangpaiboon, Takayuki Tohge, Joachim Kopka, Rainer Hoefgen, Kazuki Saito, Supaart Sirikantaramas
[ doi:10.3389/fpls.2021.687799 ]
- "Coordinating the morphogenesis-differentiation balance by tweaking the cytokinin-gibberellin equilibrium," PLos Genetics, vol.17, ppe1009537, 26 Apr. 2021
- Alon Israeli, Yogev Burko, Sharona Shleizer-Burko, Iris Daphne Zelnik, Noa Sela, Mohammad R Hajirezaei, Alisdair R Fernie, Takayuki Tohge, Naomi Ori, Maya Bar
[ doi:10.1371/journal.pgen.1009537 ]
- "Diversity of Chemical Structures and Biosynthesis of Polyphenols in Nut-Bearing Species," Frontiers in Plant Science, vol.12, pp642581, 6 Apr. 2021
- Chaiwat Aneklaphakij, Tomoki Saigo, Mutsumi Watanabe, Thomas Naake, Alisdair R Fernie, Somnuk Bunsupa, Veena Satitpatipan, Takayuki Tohge
[ doi:10.3389/fpls.2021.642581 ]
- "Cross-Species Metabolic Profiling of Floral Specialized Metabolism Facilitates Understanding of Evolutional Aspects of Metabolism Among Brassicaceae Species," Frontiers in Plant Science, vol.12, pp640141, 31 Mar. 2021
- Yuting Liu, Mutsumi Watanabe, Sayuri Yasukawa, Yuriko Kawamura, Chaiwat Aneklaphakij, Alisdair R Fernie, Takayuki Tohge
[ doi:10.3389/fpls.2021.640141 ]
- "Sugarcane cell suspension reveals major metabolic changes under different nitrogen starvation regimes," Bragantia, vol.80, pp1-13, 10 Mar. 2021
- Alexandra Bottcher, Adilson Pereira Domingues-Junior, Leonardo Perez de Souza, Takayuki Tohge, Wagner Luiz Araújo, Alisdair R Fernie, Paulo Mazzafera
[ doi:10.1590/1678-4499.2021-0009 ]
- "Natural Variation among Arabidopsis Accessions in the Regulation of Flavonoid Metabolism and Stress Gene Expression by Combined UV Radiation and Cold," Plant Cell Physiology, vol.Online ahead of print, 5 Feb. 2021
- Elisa Schulz, Takayuki Tohge, Barbro Winkler, Andreas Albert, Anton R. Schaffner, Alisdair R. Fernie, Ellen Zuther, Dirk K. Hincha
[ doi:10.1093/pcp/pcab013 ]
- "Kingdom-wide analysis of the evolution of the plant type III polyketide synthase superfamily," Plant Physiology, vol.Online ahead of print, 30 Dec. 2020
- Thomas Naake, Hiroshi A. Maeda, Sebastian Proost, Takayuki Tohge, Alisdair R. Fernie
[ doi:10.1093/plphys/kiaa086 ]
- "Selection of a subspecies-specific diterpene gene cluster implicated in rice disease resistance," Nature Plants, vol.6, no.12, pp1447-1454, 7 Dec. 2020
- Chuansong Zhan, Long Lei, Zixin Liu, Shen Zhou, Chenkun Yang, Xitong Zhu, Hao Guo, Feng Zhang, Meng Peng, Meng Zhang, Yufei Li, Zixin Yang, Yangyang Sun, Yuheng Shi, Kang Li, Ling Liu, Shuangqian Shen, Xuyang Wang, Jiawen Shao, Xinyu Jing, Zixuan Wang, Yi Li, Tomasz Czechowski, Morifumi Hasegewa, Ian Graham, Takayuki Tohge, Lianghuan Qu, Xianqing Liu, Alisdair R Fernie, Ling-Ling Chen, Meng Yuan, Jie Luo
[ doi:10.1038/s41477-020-00816-7 ]
- "Current status of the multinational Arabidopsis community," Plant Direct, vol.4, no.7, ppe00248, 2 Aug. 2020
- Geraint Parry, Nicholas J Provart, Siobhan M Brady, Baris Uzilday, Multinational Arabidopsis Steering Committee
[ doi:10.1002/pld3.248. ]
- "From Fruit-Omics to Fruiting Omics: Systematic Studies of Tomato Fruiting by Metabolic Networks," Molecular Plant, vol.S1674-2052, no.20, pp30225-2, 22 Jul. 2020
- Takayuki Tohge
[ doi:10.1016/j.molp.2020.07.012. ]
- "The genomes uncoupled-dependent Signalling Pathway Coordinates Plastid Biogenesis With the Synthesis of Anthocyanins," Philos Trans R Soc Lond B Biol Sci., vol.375, pp20190403, 22 Jun. 2020
- Andreas S Richter, Takayuki Tohge, Alisdair R Fernie, Bernhard Grimm
- "Quantitative Trait Loci Analysis (QTL) of Seed Specialized Metabolites Reveals Seed-Specific Flavonols and Differential Regulation of Glycoalkaloid Content in Tomato," The Plant Journal, vol.accepted, 15 Jun. 2020
- Saleh Alseekh, Itai Ofner, Zhongyuan Liu, Sonia Osorio, Jose Vallarino, Robert L. Last, Dani Zamir, Takayuki Tohge, Alisdair R. Fernie
[ doi:10.1111/tpj.14879 ]
- "Genetic Manipulation of Transcriptional Regulators Alters Nicotine Biosynthesis in Tobacco ," Plant Cell Physiol, vol.61, no.6, pp1041-1053, 2020.6
- S. Hayashi, M. Watanabe, M. Kobayashi, 峠 隆之, 橋本 隆, T. Shoji
[ doi:10.1093/pcp/pcaa036. ]
- "Cross-Species Comparison of Fruit-Metabolomics to Elucidate Metabolic Regulation of Fruit Polyphenolics Among Solanaceous Crops," Metabolites, 19 May. 2020
- Carla Lenore F. Calumpang, Tomoki Saigo, Mutsumi Watanabe, Takayuki Tohge
[ doi:10.3390/metabo10050209 ]
- "Co-Regulation of Clustered and Neo-Functionalized Genes in Plant-Specialized Metabolism," Plants, vol.9, ppE622, 13 May. 2020
- Takayuki Tohge, Alisdair R Fernie
[ doi:10.3390/plants9050622 ]
- "Metabolomic Markers and Physiological Adaptations for High Phosphate Utilization Efficiency in Rice," Plant, Cell & Environment, vol.43, pp2066-2079, 3 May. 2020
- Mutsumi Watanabe, Yoshiaki Ueda, Katsuhiko Kondo, Satoru Ishikawa, Takayuki Tohge, Asdrubal Burgos, Yariv Brotman, Alisdair R Fernie, Dirk Walther, Rainer Hoefgen, Matthias Wissuwa
[ doi:10.1111/pce.13777 ]
- "Exploiting the Natural Variation in Tomato to Define Pathway Structure and Metabolic Regulation of Fruit Polyphenolics in the Lycopersicum Complex," Molecular Plant, vol.S1674-2052, pp1-20, 16 Apr. 2020
- Takayuki Tohge, Federico Scossa, Regina Wendenburg, Pierre Frasse, Ilse Balbo, Mutsumi Watanabe, Saleh Alseekh, Sagar Sudam Jadhav, Jay C Delfin, Marc Lohse, Patrick Giavalisco, Bjoern Usadel, Youjun Zhang, Jie Luo, Mondher Bouzayen, Alisdair R Fernie
- "Diversity of anthocyanin and proanthocyanin biosynthesis in land plants," Current Opinion in Plant Biology, vol.55, pp93-99, 5 Apr. 2020
- Tomoki Saigo, Tong Wang, Mutsumi Watanabe, Takayuki Tohge
 [ NAISTレポジトリ ] [ doi:10.1016/j.pbi.2020.04.001 ]
- "Manipulation of ZDS in tomato exposes carotenoid‐ and ABA‐specific effects on fruit development and ripening," Plant Biotechnology Journal, pp1-15, 14 Mar. 2020
- Ryan P. McQuinn, Nigel E. Gapper, Amanda G. Gray, Silin Zhong, Takayuki Tohge, Zhangjun Fei, Alisdair R. Fernie, James J. Giovannoni
[ doi:10.1111/pbi.13377 ]
- "Expression Atlas of Selaginella moellendorffii Provides Insights into the Evolution of Vasculature, Secondary Metabolism, and Roots.," The Plant Cell, vol.32, pp853-870, 27 Jan. 2020
- Camilla Ferrari, Devendra Shivhare, Bjoern Oest Hansen, Asher Pasha, Eddi Esteban, Nicholas J. Provart, Friedrich Kragler, Alisdair R. Fernie, Takayuki Tohge, Marek Mutwil
[ doi:10.1105/tpc.19.00780. ]
- "Dissection of flag leaf metabolic shifts and their relationship with those occurring simultaneously in developing seed by application of non-targeted metabolomics," PLoS One, vol.15, ppe0227577, 24 Jan. 2020
- Chaoyang Hu, Jun Rao, Yue Song, Shen-An Chan, Takayuki Tohge, Bo Cui, Hong Lin, Alisdair R. Fernie, Dabing Zhang, Jianxin Shi
[ doi:10.1371/journal.pone.0227577 ]
- "The Hot and the Colorful: Understanding the Metabolism, Genetics and Evolution of Consumer Preferred Metabolic Traits in Pepper and Related Species. ," Critical Reviews in Plant Sciences, vol.38, pp339-381, 18 Dec. 2019
- Federico Scossa, Federico Roda, Takayuki Tohge, Milen I. Georgiev, Alisdair R. Fernie
[ doi:10.1080/07352689.2019.1682791 ]
- "アブラナ科植物の紫外線ストレス環境適応進化と代謝多型解析," 第56回植物化学シンポジウム プロシーディング, pp1-10, 2019.11.19
- 峠 隆之
- "The acetate pathway supports flavonoid and lipid biosynthesis in Arabidopsis.," Plant Physiology, 12 Nov. 2019
- Leonardo Perez de Souza, Karolina Garbowicz, Yariv Brotman, Takayuki Tohge, Alisdair R Fernie
[ doi:10.1104/pp.19.00683. ]
- "植物の天然物化学構造情報のデータマイニングを起点とした機能ゲノミクス," 日本化学会情報化学部会誌, vol.37, no.2, pp33-36, 2019.10.21
- 西郷 知樹, 峠 隆之
[ doi:10.11546/cicsj.37.33 ]
- "Non-aqueous fractionation revealed changing subcellular metabolite distribution during apple fruit development.," Horticulture Research, vol.6, pp98, 11 Aug. 2019
- Wasiye F. Beshir, Takayuki Tohge, Mutsumi Watanabe, Maarten L. A. T. M. Hertog, Rainer Hoefgen, Alisdair R. Fernie, Bart M. Nicolaï
[ doi:10.1038/s41438-019-0178-7 ]
- "Salt-stress secondary metabolite signatures involved in the ability of Casuarina glauca to mitigate oxidative stress.," Environmental and Experimental Botany, vol.166, pp103808, 5 Jul. 2019
- Tiago F Jorge, Takayuki Tohge, Regina Wendenburg, José C Ramalho, Fernando C Lidon, Ana I Ribeiro-Barros, Alisdair R Fernie, Carla António
[ doi:10.1016/j.envexpbot.2019.103808 ]
- "Enhancement of vitamin B6 levels in rice expressing Arabidopsis vitamin B6 biosynthesis de novo genes," The Plant Journal, vol.[Epub ahead of print], 7 May. 2019
- Nathalie Mangel, Jared B. Fudge, Kuan‐Te Li, Ting‐Ying Wu, Takayuki Tohge, Alisdair R. Fernie, Boris Szurek, Teresa B. Fitzpatrick, Wilhelm Gruissem, Hervé Vanderschuren
- "Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida," Nature Communications, vol.10, pp737, 13 Feb. 2019
- Camilla Ferrari, Sebastian Proost, Marcin Janowski, Jörg Becker, Zoran Nikoloski, Debashish Bhattacharya, Dana Price, Takayuki Tohge, Arren Bar-Even, Alisdair Fernie, Mark Stitt, Marek Mutwil
[ doi:10.1038/s41467-019-08703-2 ]
- "A MYB Triad Controls Primary and Phenylpropanoid Metabolites for Pollen Coat Patterning," Plant Physiology, 12 Feb. 2019
- Maor Battat, Asa Eitan, Ilana Rogachev, Kati Hanhineva, Alisdair R. Fernie, Takayuki Tohge, Jules Beekwilder, Asaph Aharoni
[ doi:10.1104/pp.19.00009 ]
- "Plasmodium para-aminobenzoate synthesis and salvage resolve avoidance of folate competition and adaptation to host diet.," Cell Reports, vol.26, pp356-363, 8 Jan. 2019
- Joachim Michael Matz, Mutsumi Watanabe, Mofolusho Falade, Takayuki Tohge, Rainer Hoefgen, Kai Matuschewski
[ doi:10.1016/j.celrep.2018.12.062 ]
- "Multi-tissue integration of transcriptomic and specialized metabolite profiling provides tools for assessing the common bean (Phaseolus vulgaris) metabolome," The Plant Journal, 27 Nov. 2018
- Leonardo Perez de Souza, Federico Scossa, Sebastian Proost, Elena Bitocchi, Roberto Papa, Takayuki Tohge, Alisdair R. Fernie
[ doi:10.1111/tpj.14178 ]
- "Overexpression of the vascular brassinosteroid receptor BRL3 confers drought resistance without penalizing plant growth.," Nature Communications, vol.9, no.4680, pp1-13, 8 Nov. 2018
- Norma Fàbregas, Fidel Lozano-Elena, David Blasco-Escámez, Takayuki Tohge, Cristina Martínez-Andújar, Alfonso Albacete, Sonia Osorio, Mariana Bustamante, José Luis Riechmann, Takahito Nomura, Takao Yokota, Ana Conesa, Francisco Pérez Alfocea, Alisdair R. Fernie, Ana I. Caño-Delgado
- "Understanding the function and regulation of plant secondary metabolism through metabolomics approaches," Theoretical and Experimental Plant Physiology, vol.31, pp127-138, 30 Oct. 2018
- Jay C. Delfin, Mutsumi Watanabe, Takayuki Tohge
[ doi:10.1007/s40626-018-0126-1 ]
- "The Mitochondrial Thioredoxin System Contributes to the Metabolic Responses Under Drought Episodes in Arabidopsis," Plant Cell Physiolgy, 17 Oct. 2018
- Paula da Fonseca-Pereira, Danilo M Daloso, Jorge Gago, Franklin Magnum de Oliveira Silva, Jorge A Condori-Apfata, Igor Florez-Sarasa, Takayuki Tohge, Jean-Philippe Reichheld, Adriano Nunes-Nesi, Alisdair R Fernie, Wagner L Araújo
[ doi:10.1093/pcp/pcy194 ]
- "Insect egg deposition renders plant defense against hatching larvae more effective in a salicylic acid-dependent manner.," Plant Cell & Environment, 25 Sep. 2018
- Vivien Lortzing, Jana Oberländer, Tobias Lortzing, Takayuki Tohge, Anke Steppuhn, Reinhard Kunze, Monika Hilker
[ doi:10.1111/pce.13447 ]
- "Metabolome and Lipidome Profiles of Populus × canescens Twig Tissues During Annual Growth Show Phospholipid-Linked Storage and Mobilization of C, N, and S," Frontiers in Plant Science, 5 Sep. 2018
- Mutsumi Watanabe, Florian Netzer, Takayuki Tohge, Isabel Orf, Yariv Brotman, David Dubbert, Alisdair Fernie, Heinz Rennenberg, Rainer Hoefgen, Cornelia Herschbach
[ doi:10.3389/fpls.2018.01292 ]
- "The role of persulfide metabolism during Arabidopsis seed development under light and dark conditions," Frontiers in Plant Science, 30 Aug. 2018
- Christin Lorenz, Saskia Brandt, Ljudmilla Borisjuk, Hardy Rolletsche, Nicolas Heinzel, Takayuki Tohge, Alisdair R Fernie, Hans-Peter Braun, Tatjana M. Hildebrandt
[ doi:10.3389/fpls.2018.01381 ]
- "Extended darkness induces internal turnover of glucosinolates in Arabidopsis thaliana leaves," PloS One, vol.13, ppe0202153, 9 Aug. 2018
- Saskia Brandt, Sara Fachinger, Takayuki Tohge, Alisdair Fernie, Hans-Peter Braun, Tatjana Hildebrandt
- "Carbon Atomic Survey for Identification of Selected Metabolic Fluxes," Methods in Molecular Biology, vol.1778, pp59-67, 18 May. 2018
- Leonardo Perez de Souza, Alisdair R. Fernie, Takayuki Tohge
- "Targeted LC-MS Analysis for Plant Secondary Metabolites.," Methods in Molecular Biology, vol.1778, pp171-181, 15 May. 2018
- Takafumi Shimizu, Mutsumi Watanabe, Takayuki Tohge
- "The effect of single and multiple SERAT mutants on serine and sulfur metabolism.," Frontiers in Plant Science, 7 May. 2018
- Mutsumi Watanabe, Takayuki Tohge, Alisdair R. Fernie, Rainer Hoefgen
[ doi:10.3389/fpls.2018.00702 ]
- "Transcription factor RD26 is a key regulator of metabolic reprogramming during dark-induced senescence," New Phytologist, vol.218, pp1543-1557, 16 Apr. 2018
- Iman Kamranfar, Gang‐Ping Xue, Takayuki Tohge, Mastoureh Sedaghatmehr, Alisdair R. Fernie, Salma Balazadeh, Bernd Mueller‐Roeber
[ doi:10.1111/nph.15127 ]
- "The natural variance of the Arabidopsis floral secondary metabolites," Scientific Data, vol.5, no.180051 , pp1-5, 3 Apr. 2018
- Takayuki Tohge, Monica Borghi, Alisdair R. Fernie
[ doi:10.1038/sdata.2018.51 ]
- "On the natural diversity of phenylacylated-flavonoid and their in planta function under conditions of stress.," Phytochemistry Reviews, vol.17, pp279-290, Apr. 2018
- Takayuki Tohge, Leonardo Perez de Souza, Alisdair R. Fernie
[ doi:10.1007/s11101-017-9531-3 ]
- "Comprehensive Metabolomics Studies of Plant Developmental Senescence," Methods in Molecular Biology , vol.1744, pp339-358, 2 Feb. 2018
- Mutsumi Watanabe, Takayuki Tohge, Salma Balazadeh, Alexander Erban, Patrick Giavalisco, Joachim Kopka, Bernd Mueller-Roeber, Alisdair R. Fernie, Rainer Hoefgen
- "Mapping the Arabidopsis Metabolic Landscape by Untargeted Metabolomics at Different Environmental Conditions," Molecular Plant, vol.S1674-2052, no.17, pp30242-30243, 8 Jan. 2018
- Si Wu, Takayuki Tohge, Álvaro Cuadros-Inostroza, Hao Tong, Hezi Tenenboim, Rik Kooke, Michaël Méret, Joost B. Keurentjes, Zoran Nikoloski, Alisdair R. Fernie, Lothar Willmitzer, Yariv Brotman
[ doi:10.1016/j.molp.2017.08.012 ]
- "Differentially evolved glucosyltransferases determine natural variation of rice flavone accumulation and UV-tolerance," Nature Communications, vol.8, no.1, pp1975, 1 Dec. 2017
- Meng Peng, Raheel Shahzad, Ambreen Gul, Hizar Subthain, Shuangqian Shen, Long Lei, Zhigang Zheng, Junjie Zhou, Dandan Lu, Shouchuang Wang, Elsayed Nishawy, Xianqing Liu, Takayuki Tohge, Alisdair R. Fernie, Jie Luo
[ doi:10.1038/s41467-017-02168-x ]
- "Canalization of Tomato Fruit Metabolism," The Plant Cell, vol.[Epub ahead of print], 1 Nov. 2017
- Saleh Alseekh, Hao Tong, Federico Scossa, Yariv Brotman, Florian Vigroux, Takayuki Tohge, Itai Ofner, Dani Zamir, Zoran Nikoloski, Alisdair R. Fernie
[ doi:10.1105/tpc.17.00367 ]
- "Integrative field scale phenotyping for investigating metabolic components of water stress within a vineyard," Plant Methods, vol.13, no.90, pp1-14, 30 Oct. 2017
- Jorge Gago, Alisdair R. Fernie, Zoran Nikoloski, Takayuki Tohge, Sebastiá Martorell, José Mariano Escalona, Ribas-Carbó M, Miquel Ribas-Carbó, Jaume Flexas, Hipólito Medrano
[ doi:10.1186/s13007-017-0241-z ]
- "The SAL-PAP Chloroplast Retrograde Pathway Contributes to Plant Immunity by Regulating Glucosinolate Pathway and Phytohormone Signaling," Molecular Plant-Microbe Interactions, vol.30, no.10, pp829-841, 15 Oct. 2017
- Yasuhiro Ishiga, Mutsumi Watanabe, Takako Ishiga, Takayuki Tohge, Takakazu Matsuura, Yoko Ikeda, Rainer Hoefgen, Alisdair R. Fernie, Kirankumar S. Mysore
[ doi:10.1094/MPMI-03-17-0055-R ]
- "The polyketide synthase OsPKS2 is essential for pollen exine and Ubisch body," Journal of Integrative Plant Biology, vol.59, no.9, pp612-628, 8 Sep. 2017
- Xiaolei Zhu, Jing Yu, Jianxin Shi, Takayuki Tohge, Alisdair R. Fernie, Sagit Meir, Asaph Aharoni, Dawei Xu, Dabing Zhang, Wanqi Liang
[ doi:10.1111/jipb.12574 ]
- "The genetics of plant metabolism," Annual Review of Genetics, vol.51, pp287-310, 6 Sep. 2017
- Alisdair R. Fernie, Takayuki Tohge
[ doi:10.1146/annurev-genet-120116-024640 ]
- "13CO2 labelling and mass spectral analysis of photorespiration," Photorespiration, pp157-166, 19 Aug. 2017
- Leonardo Perez de Souza, Marek Szecówka, Alisdair R. Fernie, Takayuki Tohge
[ doi:10.1007/978-1-4939-7225-8_11 ]
- "Phytochrome A and B Regulate Primary Metabolism in Arabidopsis Leaves in Response to Light," Frontiers in Plant Science, vol.8, no.1394, pp1-12, 9 Aug. 2017
- Xiaozhen Han, Takayuki Tohge, Pierce Lalor, Peter Dockery, Nicholas Devaney, lberto A. Esteves-Ferreira, Alisdair R. Fernie, Ronan Sulpice
[ doi:10.3389/fpls.2017.01394 ]
- "Performance of Arabidopsis thaliana under different light qualities: comparison of light-emitting diodes to fluorescent lamp," Functional Plant Biology, vol.44, no.7, pp727-738, 29 Jul. 2017
- Karin Köhl, Takayuki Tohge, Mark Aurel Schöttler
[ doi:10.1071/FP17051 ]
- "Current understanding of the pathways of flavonoid biosynthesis in model and crop plants," Journal of Experimental Botany, vol.68, no.15, pp4013-4028, 10 Jul. 2017
- Takayuki Tohge, Leonardo Perez de Souza, Alisdair R Fernie
[ doi:10.1093/jxb/erx177 ]
- "From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web-resources for mass spectral plant metabolomics," GigaScience, vol.6, no.7, pp1-20, 1 Jul. 2017
- Leonardo Perez de Souza, Thomas Naake, Takayuki Tohge, Alisdair R Fernie
[ doi:10.1093/gigascience/gix037 ]
- "Integration of transcriptomic and metabolic data reveals hub transcription factors involved in drought stress response in sunflower (Helianthus annuus L.)," Plant Molecular Biology, vol.94, no.4-5, pp549-564, Jul. 2017
- Sebastián Moschen, Julio A. Di Rienzo, Janet Higgins, Takayuki Tohge, Mutsumi Watanabe, Sergio González, Máximo Rivarola, Francisco García-García, Joaquin Dopazo, H. Esteban Hopp, Rainer Hoefgen, Alisdair R. Fernie, Norma Paniego, Paula Fernández, Ruth A. Heinz
[ doi:10.1007/s11103-017-0625-5 ]
- "Integrated genomics-based mapping reveals the genetics underlying maize flavonoid biosynthesis," BMC Plant Biology, vol.17, no.1, pp17, 18 Jun. 2017
- Min Jin, Xuehai Zhang, Mingchao Zhao, Min Deng, Yuanhao Du, Yang Zhou, Shouchuang Wang, Takayuki Tohge, Alisdair R. Fernie, Lothar Willmitzer, Yariv Brotma, Jianbing Yan, Weiwei Wen
[ doi:10.1186/s12870-017-0972-z ]
- "Leveraging natural variance towards enhanced understanding of phytochemical sunscreens. ," Trends in Plant Science, vol.22, no.4, pp308-315, 1 Apr. 2017
- Takayuki Tohge, Alisdair R. Fernie
[ doi:10.1016/j.tplants.2017.01.003 ]
- "Integrated transcriptomic and metabolomic analysis shows that disturbances in metabolism of tumor cells contribute to poor survival of RCC patients," Biochimica et Biophysica Acta, vol.1863, no.3, pp744-752, Mar. 2017
- Piotr Popławski, Takayuki Tohge, Joanna Bogusławska, Beata Rybicka, Zbigniew Tański, Victor Treviño, Alisdair R. Fernie, Agnieszka Piekiełko-Witkowska
[ doi:10.1016/j.bbadis.2016.12.011 ]
- "Photorespiration is crucial to the dynamic response of photosynthetic metabolism and stomatal movement to altered CO2 availability," Molecular Plant, vol.10, no.1, pp47-61, 9 Jan. 2017
- Marion Eisenhut, Andrea Bräutigam, Stefan Timm, Alexandra Florian, Takayuki Tohge, Alisdair R. Fernie, Hermann Bauwe, Andreas P.M.Weber
[ doi:10.1016/j.molp.2016 ]
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